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Research Articles

Solving the GC-Rich PCR Puzzle: A Comprehensive Troubleshooting Guide for Researchers

Amplifying GC-rich DNA templates is a common yet formidable challenge in molecular biology, often leading to failed experiments, smeared gels, and inconclusive data.

Aurora Long
Dec 02, 2025

Optimizing PCR for FFPE Samples: A Comprehensive Guide to Using DMSO and Betaine

Amplifying DNA from Formalin-Fixed Paraffin-Embedded (FFPE) tissues presents significant challenges for researchers and drug development professionals, primarily due to DNA cross-linking, fragmentation, and the high GC-content of many clinically relevant...

Noah Brooks
Dec 02, 2025

Optimizing PCR Master Mix Formulation with DMSO and Betaine: A Comprehensive Guide for Robust Amplification

This article provides a detailed guide for researchers, scientists, and drug development professionals on formulating PCR master mixes with DMSO and betaine to overcome common amplification challenges.

Matthew Cox
Dec 02, 2025

Overcoming the Challenge: A Guide to Amplifying Trinucleotide Repeat Regions with PCR Additives

Amplifying trinucleotide repeat (TNR) regions presents significant challenges in PCR due to their propensity to form complex secondary structures, leading to poor yield, specificity, and fidelity.

Aurora Long
Dec 02, 2025

Optimizing Touchdown PCR with DMSO and Betaine: A Strategic Guide for Amplifying Challenging Targets

This article provides a comprehensive guide for researchers and drug development professionals on implementing and optimizing touchdown PCR with DMSO and betaine additives.

Owen Rogers
Dec 02, 2025

How Betaine Stabilizes DNA Denaturation in PCR: A Complete Guide for Researchers

This article provides a comprehensive examination of betaine's role as a PCR enhancer, particularly for amplifying challenging GC-rich templates.

Paisley Howard
Dec 02, 2025

Optimizing PCR for GC-Rich Regions: A Comprehensive Guide to Using DMSO and Betaine

Amplifying GC-rich DNA sequences (>60% GC content) remains a significant challenge in molecular biology, often leading to PCR failure due to stable secondary structures and high melting temperatures.

Liam Carter
Dec 02, 2025

DMSO in PCR: Mechanisms and Optimization for DNA Melting Temperature Control

This article provides a comprehensive analysis of Dimethyl sulfoxide (DMSO) as a critical PCR enhancer, detailing its fundamental role in reducing DNA melting temperature (Tm) and destabilizing secondary structures, particularly...

Olivia Bennett
Dec 02, 2025

PCR Additives: Mechanisms, Applications, and Optimization Strategies for Enhanced Amplification Efficiency

This article provides a comprehensive analysis of how PCR additives overcome key amplification challenges to enhance efficiency, specificity, and yield.

Nathan Hughes
Dec 02, 2025

Breaking the Barrier: Understanding and Overcoming Challenges in GC-Rich PCR Amplification

This article provides a comprehensive analysis of the molecular mechanisms that make GC-rich DNA templates challenging to amplify via standard Polymerase Chain Reaction (PCR).

Eli Rivera
Dec 02, 2025

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